2007

60. Lee, C., Zhong, R., Richardson, E.A., Himmelsbach, D.S., McPhail, B.T., and Ye, Z.-H. (2007) The PARVUS Gene is Expressed in Cells Undergoing Secondary Wall Thickening and is Essential for Glucuronoxylan Biosynthesis. Plant Cell Physiol. 48, 1659-1672 (PDF).

59. Zhong. R., and Ye, Z.H. (2007) Regulation of cell wall biosynthesis. Curr. Opin. Plant Biol. 10, 564-572 (PDF).

58. Zhong, R., Richardson, E.A., and Ye, Z.-H. (2007) The MYB46 Transcription Factor Is a Direct Target of SND1 and Regulates Secondary Wall Biosynthesis in Arabidopsis. Plant Cell 19, 2776-2792 (PDF).

57. Lee, C., O'neill, M.A., Tsumuraya, Y., Darvill, A.G., and Ye, Z.-H. (2007) The irregular xylem9 Mutant Is Deficient in Xylan Xylosyltransferase. Plant Cell Physiol. 48, 1624-1634 (PDF).

56. Zhou, J., Qiu, J., and Ye, Z.-H. (2007) Alteration in secondary wall deposition by overexpression of the FRA1 kinesin-like protein in Arabidopsis. Journal of Integrative Plant Biology 49, 1235-1243 (PDF).

55. Burk, D.H., Zhong, R., and Ye, Z.-H. (2007) The katanin microtubule severing protein in plants. Journal of Integrative Plant Biology 49, 1174-1182 (PDF).

54. Zhong, R., and Ye, Z.-H. (2007) Regulation of HD-ZIP III genes by microRNA 165. Plant Signaling & Behavior 2, 235-237.

53. Zhou, G.K., Zhong, R., Himmelsbach, D.S., McPhail, B.T., and Ye, Z.-H. (2007) Molecular characterization of PoGT8D and PoGT43B, two secondary wall-associated glycosyltransferases in poplar. Plant Cell Physiol. 48, 689-699 (PDF).

52. Pena, M.J., Zhong, R., Zhou, G.-K., Richardson, E.A., O'neill, M.A., Darvill, A.G., York, W.S., and Ye, Z.-H. (2007) Arabidopsis irregular xylem8 and irregular xylem9: Implications for the Complexity of Glucuronoxylan Biosynthesis. Plant Cell 19, 549-563 (PDF).

51. Zhou, G.K., Kubo, M., Zhong, R., Demura, T., and Ye, Z.-H. (2007) Overexpression of miR165 Affects Apical Meristem Formation, Organ Polarity Establishment, and Vascular Development in Arabidopsis. Plant Cell Physiol. 48, 391-404 (PDF).

50. Zhong, R., Richardson, E.A., and Ye, Z.-H. (2007) Two NAC domain transcription factors, SND1 and NST1, function redundantly in regulation of secondary wall synthesis in fibers of Arabidopsis.Planta 225, 1603-1611 (PDF).

2006

49. Zhong, R., Demura, T., and Ye, Z.-H. (2006) SND1, a NAC Domain Transcription Factor, Is a Key Regulator of Secondary Wall Synthesis in Fibers of Arabidopsis. Plant Cell 18, 3158-3170 (PDF).

48. Zhou, G.K., Zhong, R., Richardson, E.A., Morrison, W.H. 3rd., Nairn, C.J,. Wood-Jones, A., and Ye, Z.-H. (2006) The poplar glycosyltransferase GT47C is functionally conserved with Arabidopsis fragile fiber8.Plant Cell Physiol. 47, 1229-1240 (PDF).

47. Ye, Z.-H., York, W.S., and Darvill, A.G. (2006) Important new players in secondary wall synthesis.Trends in Plant Science 11, 162-164 (PDF).

46. Burk, D.H., Zhong, R., Morrison, W.H., and Ye, Z.-H. (2006) Disruption of cortical microtubules by overexpression of green fluorescent protein-tagged alpha-tubulin 6 causes a marked reduction in cell wall synthesis. Journal of Integrative Plant Biology 48, 85-98 (PDF).

2005

45. Zhong, R., Pena, M.J., Zhou, G.-K., Nairn, C.J., Wood-Jones, A., Richardson, E.A., Morrison, W.H., Darvill, A.G., York, W.S., and Ye, Z.-H. (2005)The FRA8 Gene, which Encodes a Putative Glucuronyltransferase, is Essential for Normal Secondary Wall Synthesis. Plant Cell 17, 3390-3408 (PDF).

44. Zhong, R., Burk, D.H., Nairn, C.J., Wood-Jones, A., Morrison, W.H., and Ye, Z.-H. (2005) Mutation of SAC1, an Arabidopsis SAC Domain Phosphoinositide Phosphatase, Causes Alterations in Cell Morphogenesis, Cell Wall Synthesis, and Actin Organization. Plant Cell 17, 1449-1466 (PDF)

2004

43. Zhong, R., Burk, D.H., Morrison, W.H., and Ye, Z.-H. (2004) FRAGILE FIBER3, an Arabidopsis Gene Encoding a Type II Inositol Polyphosphate 5-Phosphatase, Is Required for Secondary Wall Synthesis and Actin Organization in Fiber Cells. Plant Cell 16, 3242-3259 (PDF).

42. Zhong, R., and Ye, Z.-H. (2004) Molecular and Biochemical Characterization of Three WD-Repeat Domain-containing Inositol Polyphosphate 5-Phosphatases in Arabidopsis thaliana. Plant Cell Physiol. 45, 1720-1728 (PDF).

41. Zhong, R., and Ye, Z.-H. (2004) amphivasal vascular bundle 1,a Gain-of-Function Mutation of the IFL1/REV Gene, Is Associated with Alterations in the Polarity of Leaves, Stems and Carpels. Plant Cell Physiol. 45, 369-385 (PDF)

2003

40. Zhong, R., and Ye, Z.-H. (2003) Unraveling the functions of glycosyltransferase family 47 in plants.Trends in Plant Science 8, 565-568 (PDF).

39. Hu Y, Zhong, R., Morrison, W.H., and Ye, Z.-H. (2003) The Arabidopsis RHD3 gene is required for cell wall biosynthesis and actin organization. Planta 217, 912-921 (PDF)

38. Zhong, R., Morrison W.H., Freshour G., Hahn, M.G., and Ye, Z.-H. (2003) Expression of a Mutant Form of Cellulose Synthase AtCesA7 Causes Dominant Negative Effect on Cellulose Biosynthesis. Plant Physiol. 132, 786-795 (PDF)

37. Zhong, R., and Ye, Z.-H. (2003) The SAC Domain-Containing Protein Gene Family in Arabidopsis. Plant Physiol. 132, 544-555 (PDF).

2002

36. Zhong, R., Burk, D.H., Morrison, W.H., and Ye, Z.-H. (2002) A Kinesin-Like Protein Is Essential for Oriented Deposition of Cellulose Microfibrils and Cell Wall Strength. Plant Cell 14, 3101-3117 (PDF).

35. Burk, D.H., and Ye, Z.-H. (2002) Alteration of Oriented Deposition of Cellulose Microfibrils by Mutation of a Katanin-Like Microtubule-Severing Protein. Plant Cell 14, 2145-2160 (PDF).

34. Ye, Z.-H. (2002) Vascular Tissue differentiation and Pattern Formation in Plants. Annu. Rev. Plant Biol 53, 183-202 (PDF).

33. Ye, Z.-H., Freshour G., Hahn, M.G., Burk, D.H., Zhong, R. (2002) Vascular development in Arabidopsis. Int Rev Cytol. 220, 225-56 (PDF).

32. Zhong, R., Kays, S.J., Schroeder, B.P., and Ye, Z.-H. (2002). Mutation of a chitinase-like gene causes ectopic deposition of lignin and overproduction of ethylene. Plant Cell 14, 165-179 (PDF).

2001

31. Burk, D.H., Liu, B., Zhong, R., Morrison, W.H., and Ye, Z.-H. (2001). A katanin-like protein regulates normal cell wall biosynthesis and cell elongation. Plant Cell 13, 807-827 (PDF).

30. Zhong, R. and Ye, Z.-H. (2001). Alteration of auxin polar transport in the Arabidopsis ifl1 mutants. Plant Physiol. 126, 549-563 (PDF).

29. Ye, Z.-H., Zhong, R., Morrison, W.H., and Himmelsbach, D.S. (2001). Caffeoyl coenzyme A O-methyltransferase and lignin biosynthesis. Phytochemistry 57, 1177-1185 (PDF).

28. Zhong, R., Burk, D.H., and Ye, Z.-H. (2001). Fibers. A model for studying cell differentiation, cell elongation and cell wall biosynthesis. Plant Physiol. 126, 477-479 (PDF).

1997-2000

27. Zhong, R., Ripperger, A., and Ye, Z.-H. (2000).Ectopic deposition of lignin in the pith of stems of two Arabidopsis mutants. Plant Physiol. 123, 59-69 (PDF).

26. Zhong, R., Morrison, W.H., Himmelsbach, D.S., Poole, F.L., and Ye, Z.-H. (2000). Essential role of caffeoyl CoA O-methyltransferase in lignin biosynthesis in woody poplar plants. Plant Physiol. 124, 563-577 (PDF).

25. Zhong, R. and Ye, Z.-H. (1999). IFL1, a gene regulating interfascicular fiber differentiation in Arabidopsis, encodes a homeodomain-leucine zipper protein. Plant Cell 11, 2139-2152 (PDF).

24. Zhong, R., Taylor, J.T., and Ye, Z.-H. (1999). Transformation of the collateral vascular bundles into amphivasal vascular bundles in an Arabidopsis mutant. Plant Physiol. 120, 53-64 (PDF).

23. Zhong, R., Morrison, W.H., Negrel, J., and Ye, Z.-H. (1998). Dual methylation pathways in lignin biosynthesis. Plant Cell 10, 2033-2045 (PDF).

22. Zhong, R., Taylor, J.T., and Ye, Z.-H. (1997). Disruption of interfascicular fiber differentiation in an Arabidopsis mutant. Plant Cell 9, 2159-2170 (PDF).

21. Ye, Z.-H. (1997). Association of caffeoyl CoA 3-O-methyltransferase expression with lignifying tissues in several dicot plants. Plant Physiol. 115, 1341-1350 (PDF).

1991-1996

20. Ye, Z.-H. (1996). Expression patterns of cinnamic acid 4-hydroxylase gene during lignification in Zinnia elegans. Plant Science 121, 133-141.

19. Ye, Z.-H., and Droste, D.L. (1996). Isolation and characterization of cDNAs encoding xylogenesis-associated and wounding-induced ribonucleases in Zinnia elegans. Plant Mol. Biol. 30, 697-709.

18. Ye, Z.-H., and Varner, J.E. (1996). Induction of cysteine and serine proteases during xylogenesis in Zinnia elegans. Plant Mol. Biol. 30, 1233-1246.

17. Varner, J.E., and Ye, Z.-H. (1995). Tissue printing to detect proteins and RNA in plant tissues. In Methods in Plant Molecular Biology. A Laboratory Course Manual, Maliga P., Klessig D.F., Cashmore, A.R., Gruissem, W., and Varner, J.E., eds (Cold Spring Harbor: Cold Spring Harbor Laboratory Press), pp. 79-94.

16. Ye, Z.-H., and Varner, J.E. (1995). Differential expression of two O-methyltransferases in lignin biosynthesis in Zinnia. Plant Physiol. 108, 459-467.

15. Ye, Z.-H., and Varner, J.E. (1994). Expression of an auxin- and cytokinin-regulated gene in cambial region in Zinnia. Proc. Natl. Acad. Sci. USA 91, 6539-6543.

14. Ye, Z.-H., Kneusel, R.E., Matern, U., and Varner, J.E. (1994). An alternative methylation pathway in lignin biosynthesis in Zinnia. Plant Cell 6, 1427-1439.

13. Varner, J.E., and Ye, Z.-H. (1994). Tissue printing. FASEB J. 8, 378-384.

12. Ye, Z.-H., and Varner, J.E. (1993). Gene expression patterns associated with in vitro tracheary element formation in isolated single mesophyll cells of Zinnia elegans. Plant Physiol. 103, 805-813.

11. Song, Y.-R., Ye, Z.-H., and Varner, J.E. (1993). Tissue-printing hybridization on membrane for localization of mRNA in plant tissue. Methods in Enzymology 218, 671-681.

10. Ye, Z.-H., Song, Y.-R., and Varner, J.E. (1992). Gene expression in plants. In Tissue Printing, Tools for the Study of Anatomy, Histochemistry, and Gene Expression, Reid, P.D., Pont-Lezica, R.F., Campillo, E.D., and Taylor, R., eds (San Diego:Academic Press), pp. 95-123.

9. Ye, Z.-H., Song, Y.-R., and Varner, J.E. (1992). Insolubilization of cell wall proteins in developing soybean stems. In Tissue Printing, Tools for the Study of Anatomy, Histochemistry, and Gene Expression, Reid, P.D., Pont-Lezica, R.F., Campillo, E.D., and Taylor, R., eds (San Diego:Academic Press), pp. 51-54.

8. Ye, Z.-H., Song, Y.-R., Marcus, A., and Varner, J.E. (1991). Comparative localization of three classes of cell wall proteins. Plant J. 1, 175-183.

7. Ye, Z.-H., and Varner, J.E. (1991). Tissue-specific expression of cell wall proteins in developing soybean tissues. Plant Cell 3, 23-37.

1986-1990

6. Ye, Z.-H., Guo, J.-F., and Sun, D-Y. (1990). Quantitative assay of plant calmodulin by phosphodiesterase. Plant Physiology Communication Sinica 1, 54-56.

5. Ye, Z.-H., Guo, J.-F., and Sun, D.-Y. (1989). Studies on cell wall calmodulin and calmodulin-binding proteins of wheat etiolated coleoptiles. Acta Phytophysiologica Sinica 15, 223-229.

4. Ye, Z.-H., Sun, D.-Y., and Guo, J.-F. (1988). Preliminary study on wheat cell wall calmodulin. Chinese Science Bulletin 34, 158-161.

3. Ye, Z.-H., Sun, D.-Y., and Guo, J.-F. (1988). Preparation of calmodulin affinity column and its application on the preparation of calmodulin-binding proteins. Progress in Biochemistry and Biophysics Sinica 15, 394-397.

2. Guo, J.-F., Ye, Z.-H. (1987). The effects of boric acid and gibberellic acid on the growth of the fiber of Phragmites Communis Trin. Acta Botanica Sinica 29, 401-406.

1. Guo, J.-F., Ye, Z.-H., Sun, Y.-S. (1986). The effects of gibberellic acid and boron on the improve-ment of fiber quality of Phragmites Communis Trin. Acta Agriculturae Boreali-Sinica 1, 1-7.